Sai Prasanna

Hi,
Do you guys have any reference manuals for the latest release of BRAPH2?
I was interested in knowing what the variables mean. For example, in the following lines,

strength_WU_diff = c_WU.getComparison(‘Strength’).get(‘DIFF’);
strength_WU_p1 = c_WU.getComparison(‘Strength’).get(‘P1’);
strength_WU_p2 =…[Read more]

Yes, that’s right.
Thank you.

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Sai Prasanna

I used AAL Atlas, and the size of adjacency matrices for each of the 800 subjects is 116 * 116.
Executing precisely the code you provided took approximately the same time, or maybe a little more. But not hours, for sure.
Yes, I have installed the parallel computing toolbox.
I did not execute the comparison part. I was interested in obtaining the…[Read more]

Thanks. That works perfectly for me.
On an average configured system and for two groups with around 400 subjects each, completing the above task takes about 65 hours. Is that a usual case?

Thanks for your responses.
Sorry, if I’m asking too many questions.

1. I just tried as you mentioned. However, after running my script for calculating the analysis,

ms1 = cellfun(@(x) x.getMeasure(‘Degree’).memorize(‘M’), analysis.memorize(‘G_DICT’).getItems, ‘UniformOutput’, false)

gives me an error that says, “Unable to resolve the name…[Read more]

I’m trying to use the example_FUN_BUD as you mentioned. I need to calculate all the graph metrics. The example file mentions 2-3 metrics. Do I use similar methods for all other metrics ?

I would appreciate your guidance on saving the individual subject correlation matrices as well.

Thanks. I will try that.

Also, the GUI is giving me an option of exporting the results as a JSON file only. Could you please let me know how I can save the group average results into an XLS file ?

Thanks, I realised that immediately after posting here. My bad.

Thank you for your quick response. Much appreciated.

Hi,
Thanks so much for your quick response. Feel motivated by active moderators like you.

1. The dataset I have started with is the ABIDE-I Preprocessed data. The time-series values are already available for various Atlases in text files for each subject. Is there any way I could generate the connectivity matrix using the data in this format?
2. I…

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