Efficiently extracting network measures from saved .b2 file

[Nabin Koirala]

Can I load the saved .b2 file in matlab and export all computed network measures in some format ? I should mention this that I know that I could click on them and get the table and save as .xlsx but I would prefer not to do that 20 times for all the measures. I have asked this before and Emiliano helped me with the script to extract those measures but that computes everything from the start. So, i would like to know how can I do it if I already have the saved comparison in .b2 format? Thank you.

[Emiliano Gomez]

This question was solved with the following example of code:

*Note***
In Nabin’s case the saved b2 file was a Comparison of Structural groups.

[file, path, filterindex] = uigetfile(BRAPH2.EXT_ELEMENT, [‘Select the .b2 file.’]);
tmp = load(filename, ‘-mat’, ‘el’);
filename = fullfile(path, file);
tmp = load(filename, ‘-mat’, ‘el’);
comparison = tmp.el
% for group 1
a1 = comparison.get(‘A1’)
g1 = a1.get(‘G’)
m_dict1 = g1.get(‘m_dict’)
measure_names = m_dict1.getKeys();
measures = m_dict1.getItems();
vals = cellfun(@(x) x.get(‘M’), measures, ‘UniformOutput’, false)

Emiliano Gomez

[Nabin Koirala]

Thanks Emiliano for your help on this.

[Author]

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