I recently conducted PET graph analysis by using Braph.I found a problem about ‘Comepare with random graph ‘.In the popup window，it doesn’t work when i chose graph measure and click ‘Calculate’.
Could you explain this problem for me? Thank You very much!
Thank you for your interest in Braph. I hope that you will find it useful and you will use it during your research.
I did a check on Braph for this issue (however I did it with fMRI data as I do not have currently a PET data available) and it seems to work. In order to check it properly, could you send me a sample of your data so that I can check and see how to solve the problem.
Additionally, depending on your size of the adjacency matrix, it might be that it just takes a long time to randomize the matrix and the computer crashes during the calculation. The reason is, the commonly used algorithm for matrix randomization is rather slow. Therefore, I would suggest trying to compare your data with only 5-10 random graphs and use a low number of edge swaps. Maybe this will solve the problem and calculate what you need.
Hope this was useful for you. If there is anything more I could do, please let me know.